Publications 2008

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– Aajoud A, Raveton M, Azrou-Isghi D, Tissut M, Ravanel P (2008) How can the fipronil insecticide access phloem ? Journal of Agricultural and Food Chemistry 56, 3732-3737.

– Albert CH, Thuiller W (2008) Favourability functions versus probability of presence : advantages and misuses. Ecography 31, 417-422.

– Albert CH, Thuiller W, Lavorel S, Davies ID, Garbolino E (2008) Land-use change and subalpine tree dynamics : colonization of Larix decidua in French subalpine grasslands. Journal of Applied Ecology 45, 659-669.

– Bakker MM, Govers G, van Doom A, Quetier F, Chouvardas D, Rounsevell M (2008) The response of soil erosion and sediment export to land-use change in four areas of Europe : The importance of landscape pattern. Geomorphology 98, 213-226.

– Baptist F, Choler P (2008) A simulation of the importance of length of growing season and canopy functional properties on the seasonal gross primary production of temperate alpine meadows. Annals of Botany 101, 549-559.

– Baptist F, Zinger L, Clement JC, Gallet C, Guillemin R, Martins JMF, Sage L, Shahnavaz B, Choler P, Geremia R (2008) Tannin impacts on microbial diversity and the functioning of alpine soils : a multidisciplinary approach. Environmental Microbiology 10, 799-809.

– Barnard P, Thuiller W (2008) Introduction. Global change and biodiversity : future challenges. Biology Letters 4, 553-555.

– Bonin A, Paris M, Despres L, Tetreau G, David JP, Kilian A (2008) A MITE-based genotyping method to reveal hundreds of DNA polymorphisms in an animal genome after a few generations of artificial selection. Bmc Genomics 9.

– Buisson L, Thuiller W, Lek S, Lim P, Grenouillet G (2008) Climate change hastens the turnover of stream fish assemblages. Global Change Biology 14, 2232-2248.

– Carriconde F, Gardes M, Jargeat P, Heilmann-Clausen J, Mouhamadou B, Gryta H (2008) Population evidence of cryptic species and geographical structure in the cosmopolitan ectomycorrhizal fungus, Tricholoma scalpturatum. Microbial Ecology 56, 513-524.

– Carriconde F, Gryta H, Jargeat P, Mouhamadou B, Gardes M (2008) High sexual reproduction and limited contemporary dispersal in the ectomycorrhizal fungus Tricholoma scalpturatum : new insights from population genetics and spatial autocorrelation analysis. Molecular Ecology 17, 4433-4445.

– Catinon M, Ayrault S, Daudin L, Sevin L, Asta J, Tissut M, Ravanel P (2008) Atmospheric inorganic contaminants and their distribution inside stem tissues of Fraxinus excelsior L. Atmospheric Environment 42, 1223-1238.

– Chaton PF, Lemperiere G, Tissut M, Ravanel P (2008) Biological traits and feeding capacity of Agriotes larvae (Coleoptera : Elateridae) : A trial of seed coating to control larval populations with the insecticide fipronil. Pesticide Biochemistry and Physiology 90, 97-105.

– Conord C, Despres L, Vallier A, Balmand S, Miquel C, Zundel S, Lemperiere G, Heddi A (2008) Long-term evolutionary stability of bacterial endosymbiosis in curculionoidea : Additional evidence of symbiont replacement in the dryophthoridae family. Molecular Biology and Evolution 25, 859-868.

– de Chazal J, Quetier F, Lavorel S, Van Doorn A (2008) Including multiple differing stakeholder values into vulnerability assessments of socio-ecological systems. Global Environmental Change-Human and Policy Dimensions 18, 508-520.

– Faubet P, Gaggiotti OE (2008) A new Bayesian method to identify the environmental factors that influence recent migration. Genetics 178, 1491-1504.

– Ficetola GF, Bonin A, Miaud C (2008) Population genetics reveals origin and number of founders in a biological invasion. Molecular Ecology 17, 773-782.

– Ficetola GF, Furlani D, Colombo G, De Bernardi F (2008) Assessing the value of secondary forest for amphibians : Eleutherodactylus frogs in a gradient of forest alteration. Biodiversity and Conservation 17, 2185-2195.

– Ficetola GF, Miaud C, Pompanon F, Taberlet P (2008) Species detection using environmental DNA from water samples. Biology Letters 4, 423-425.

– Foll M, Beaumont MA, Gaggiotti O (2008) An approximate Bayesian computation approach to overcome biases that arise when using amplified fragment length polymorphism markers to study population structure. Genetics 179, 927-939.

– Foll M, Gaggiotti O (2008) A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers : A Bayesian Perspective. Genetics 180, 977-993.

– Gaudeul M, Till-Bottraud I (2008) Genetic structure of the endangered perennial plant Eryngium alpinum (Apiaceae) in an alpine valley. Biological Journal of the Linnean Society 93, 667-677.

– Gautier P, Barroca M, Bertrand S, Eraud C, Gaillard M, Hamman M, Motreuil S, Sorci G, Faivre B (2008) The presence of females modulates the expression of a carotenoid-based sexual signal. Behavioral Ecology and Sociobiology 62, 1159-1166.

– Gross N, Robson TM, Lavorel S, Albert C, Le Bagousse-Pinguet Y, Guillemin R (2008) Plant response traits mediate the effects of subalpine grasslands on soil moisture. New Phytologist 180, 652-662.

– Gugerli F, Englisch T, Niklfeld H, Tribsch A, Mirek Z, Ronikier M, Zimmermann NE, Holderegger R, Taberlet P, IntraBioDiv C (2008) Relationships among levels of biodiversity and the relevance of intraspecific diversity in conservation - a project synopsis. Perspectives in Plant Ecology Evolution and Systematics 10, 259-281.

– Gury J, Zinger L, Gielly L, Taberlet P, Geremia RA (2008) Exonuclease activity of proofreading DNA polymerases is at the origin of artifacts in molecular profiling studies. Electrophoresis 29, 2437-2444.

– Holderegger R, Herrmann D, Poncet B, Gugerli F, Thuiller W, Taberlet P, Gielly L, Rioux D, Brodbeck S, Aubert S, Manel S (2008) Land ahead : using genome scans to identify molecular markers of adaptive relevance. Plant Ecology & Diversity 1, 273-283.

– Joost S, Kalbermatten M, Bonin A (2008) Spatial analysis method(SAM) : a software tool combining molecular and environmental data to identify candidate loci for selection. Molecular Ecology Resources 8, 957-960.

– Keith DA, Akcakaya HR, Thuiller W, Midgley GF, Pearson RG, Phillips SJ, Regan HM, Araujo MB, Rebelo TG (2008) Predicting extinction risks under climate change : coupling stochastic population models with dynamic bioclimatic habitat models. Biology Letters 4, 560-563.

– Kittlein MJ, Gaggiotti OE (2008) Interactions between environmental factors can hide isolation by distance patterns : a case study of Ctenomys rionegrensis in Uruguay. Proceedings of the Royal Society B-Biological Sciences 275, 2633-2638.

– Klimesova J, Latzel V, de Bello F, van Groenendael JM (2008) Plant functional traits in studies of vegetation changes in response to grazing and mowing : towards a use of more specific traits. Preslia 80, 245-253.

– Lavorel S, Grigulis K, McIntyre S, Williams NSG, Garden D, Dorrough J, Berman S, Quetier F, Thebault A, Bonis A (2008) Assessing functional diversity in the field - methodology matters ! Functional Ecology 22, 134-147.

– Le Maitre DC, Thuiller W, Schonegevel L (2008) Developing an approach to defining the potential distributions of invasive plant species : a case study of Hakea species in South Africa. Global Ecology and Biogeography 17, 569-584.

– Loison A, Darmon G, Cassar S, Jullien JM, Maillard D (2008) Age- and sex-specific settlement patterns of chamois (Rupicapra rupicapra) offspring. Canadian Journal of Zoology-Revue Canadienne De Zoologie 86, 588-593.

– Luikart G, Zundel S, Rioux D, Miquel C, Keating KA, Hogg JT, Steele B, Foresman K, Taberlet P (2008) Low genotyping error rates and noninvasive sampling in bighorn sheep. Journal of Wildlife Management 72, 299-304.

– Marcombe S, Poupardin R, Darriet F, Strode C, Yebakima A, Ranson H, David JP, Corbel V (2008) IDENTIFICATION OF METABOLIC INSECTICIDE RESISTANCE GENES IN AEDES AEGYPTI FROM MARTINIQUE (FRENCH WEST INDIES) : FROM GENOTYPES TO PHENOTYPES. American Journal of Tropical Medicine and Hygiene 79, 232.

– Marmion M, Hjort J, Thuiller W, Luoto M (2008) A comparison of predictive methods in modelling the distribution of periglacial landforms in Finnish Lapland. Earth Surface Processes and Landforms 33, 2241-2254.

– Marquis O, Miaud C (2008) Variation in UV sensitivity among common frog Rana temporaria populations along an altitudinal gradient. Zoology 111, 309-317.

– Marquis O, Miaud C, Lena JP (2008) Developmental responses to UV-B radiation in common frog Rana temporaria embryos from along an altitudinal gradient. Population Ecology 50, 123-130.

– McLaughlin LA, Niazi U, Bibby J, David JP, Vontas J, Hemingway J, Ranson H, Sutcliffe MJ, Paine MJI (2008) Characterization of inhibitors and substrates of Anopheles gambiae CYP6Z2. Insect Molecular Biology 17, 125-135.

– Melodelima C, Gautier C (2008) The GC-heterogeneity of teleost fishes. Bmc Genomics 9.

– Mermillod-Blondin F, Poggiale JC, Tolla C, Auger P, Thuiller W, Chatelliers MC (2008) Using a mathematical model to simulate the influence of tubificid worms (Oligochaeta) on oxygen concentrations in hyporheic sediments. Fundamental and Applied Limnology 172, 135-145.

– Mondet C, Abed-Vieillard D, Gautier P, Farine JP (2008) Could male tergal secretions be considered as a nuptial gift in the Madeira cockroach ? Animal Behaviour 75, 451-460.

– Mouhamadou B, Carriconde F, Gryta H, Jargeat P, Manzi S, Gardes M (2008) Molecular evolution of mitochondrial ribosomal DNA in the fungal genus Tricholoma : Barcoding implications. Fungal Genetics and Biology 45, 1219-1226.

– Mraz P, Singliarova B, Urfus T, Krahulec F (2008) Cytogeography of Pilosella officinarum (Compositae) : Altitudinal and longitudinal differences in ploidy level distribution in the czech republic and slovakia and the general pattern in europe. Annals of Botany 101, 59-71.

– Naderi S, Rezaei HR, Pompanon F, Blum MGB, Negrini R, Naghash HR, Balkiz O, Mashkour M, Gaggiotti OE, Ajmone-Marsan P, Kence A, Vigne JD, Taberlet P (2008) The goat domestication process inferred from large-scale mitochondrial DNA analysis of wild and domestic individuals. Proceedings of the National Academy of Sciences of the United States of America 105, 17659-17664.

– Niu KC, Luo YJ, Choler P, Du GZ (2008) The role of biomass allocation strategy in diversity loss due to fertilization. Basic and Applied Ecology 9, 485-493.

– Oromi N, Marquis O, Miaud C, Sanuy D (2008) Influence of ambient ultraviolet radiation on Bufo calamita egg development in a semiarid zone (Catalonia, Spain). Journal of Environmental Biology 29, 135-137.

– Pakeman RJ, Garnier E, Lavorel S, Ansquer P, Castro H, Cruz P, Dolezal J, Eriksson O, Freitas H, Golodets C, Kigel J, Kleyer M, Leps J, Meier T, Papadimitriou M, Papanastasis VP, Quested H, Quetier F, Rusch G, Sternberg M, Theau JP, Thebault A, Vile D (2008) Impact of abundance weighting on the response of seed traits to climate and land use. Journal of Ecology 96, 355-366.

– Pompe S, Hanspach J, Badeck F, Klotz S, Thuiller W, Kuhn I (2008) Climate and land use change impacts on plant distributions in Germany. Biology Letters 4, 564-567.

– Poupardin R, Reynaud S, Strode C, Ranson H, Vontas J, David JP (2008) Cross-induction of detoxification genes by environmental xenobiotics and insecticides in the mosquito Aedes aegypti : Impact on larval tolerance to chemical insecticides. Insect Biochemistry and Molecular Biology 38, 540-551.

– Puscas M, Choler P, Tribsch A, Gielly L, Rioux D, Gaudeul M, Taberlet P (2008) Post-glacial history of the dominant alpine sedge Carex curvula in the European Alpine System inferred from nuclear and chloroplast markers. Molecular Ecology 17, 2417-2429.

– Puscas M, Taberlet P, Choler P (2008) No positive correlation between species and genetic diversity in European alpine grasslands dominated by Carex curvula. Diversity and Distributions 14, 852-861.

– Reynaud S, Raveton M, Ravanel P (2008) Interactions between immune and biotransformation systems in fish : A review. Aquatic Toxicology 87, 139-145.

– Rickebusch S, Thuiller W, Hickler T, Araujo MB, Sykes MT, Schweiger O, Lafourcade B (2008) Incorporating the effects of changes in vegetation functioning and CO2 on water availability in plant habitat models. Biology Letters 4, 556-559.

– Salmon S, Frizzera L, Camaret S (2008) Linking forest dynamics to richness and assemblage of soil zoological groups and to soil mineralization processes. Forest Ecology and Management 256, 1612-1623.

– San Miguel A, Raveton M, Lemperiere G, Ravanel P (2008) Phenylpyrazoles impact on Folsomia candida (Collembola). Soil Biology & Biochemistry 40, 2351-2357.

– Segelbacher G, Manel S, Tomiuk J (2008) Temporal and spatial analyses disclose consequences of habitat fragmentation on the genetic diversity in capercaillie (Tetrao urogallus). Molecular Ecology 17, 2356-2367.

– Serandour J, Reynaud S, Willison J, Patouraux J, Gaude T, Ravanel P, Lemperiere G, Raveton M (2008) Ubiquitous Water-Soluble Molecules in Aquatic Plant Exudates Determine Specific Insect Attraction. Plos One 3.

– Strode C, Wondji CS, David JP, Hawkes NJ, Lumjuan N, Nelson DR, Drane DR, Karunaratne S, Hemingway J, Black WC, Ranson H (2008) Genomic analysis of detoxification genes in the mosquito Aedes aegypti. Insect Biochemistry and Molecular Biology 38, 113-123.

– Taberlet P, Valentini A, Rezaei HR, Naderi S, Pompanon F, Negrini R, Ajmone-Marsan P (2008) Are cattle, sheep, and goats endangered species ? Molecular Ecology 17, 275-284.

– Thuiller W, Albert C, Araujo MB, Berry PM, Cabeza M, Guisan A, Hickler T, Midgely GF, Paterson J, Schurr FM, Sykes MT, Zimmermann NE (2008) Predicting global change impacts on plant species’ distributions : Future challenges. Perspectives in Plant Ecology Evolution and Systematics 9, 137-152.

– Tilquin M, Paris M, Reynaud S, Despres L, Ravanel P, Geremia RA, Gury J (2008) Long Lasting Persistence of Bacillus thuringiensis Subsp israelensis (Bti) in Mosquito Natural Habitats. Plos One 3.

– Tomasevic N, Cvetkovic D, Miaud C, Aleksic I, Crnobrnja-Isailovic J (2008) Interannual variation in life history traits between neighbouring populations of the widespread amphibian bufo bufo. Revue D Ecologie-La Terre Et La Vie 63, 371-381.

– van Vliet N, Zundel S, Miquel C, Taberlet P, Nasi R (2008) Distinguishing dung from blue, red and yellow-backed duikers through noninvasive genetic techniques. African Journal of Ecology 46, 411-417.

– Zinger L, Gury J, Alibeu O, Rioux D, Gielly L, Sage L, Pompanon F, Geremia RA (2008) CE-SSCP and CE-FLA, simple and high-throughput alternatives for fungal diversity studies. Journal of Microbiological Methods 72, 42-53.